Metatranscriptome of marine bacterioplankton during winter time in the North Sea assessed by total RNA sequencing


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Antje.Wichels [ at ] awi.de

Abstract

Marine metatranscriptome data was generated as part of a study investigating the bacterioplankton communities towards the end of a diatom-dominated spring phytoplankton bloom. This genomic resource article reports a metatranscriptomic dataset from amidst the winter time prior to the occurrence of the spring diatom bloom. Up to 58% of all sequences could be assigned to predicted genes. Taxonomic analysis based on expressed 16S ribosomal RNA genes identified Alphaproteobacteria and Gammaproteobacteria as the most active community members.



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ISI/Scopus peer-reviewed
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Published
Eprint ID
36618
DOI 10.1016/j.margen.2014.11.001

Cite as
Kopf, A. , Kostadinov, I. , Wichels, A. , Quast, C. and Glöckner, F. O. (2015): Metatranscriptome of marine bacterioplankton during winter time in the North Sea assessed by total RNA sequencing , Marine Genomics, 19 , pp. 45-46 . doi: 10.1016/j.margen.2014.11.001


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