Oyster reefs are ecologically important habitats that have been suffering from anthropogenic stressors and severe damages over the past century. More than 85 % of the world's oyster reefs have already been destroyed, have disappeared or their existence is under severe and immediate threat. Due to their central ecological importance for benthic and bentho-pelagic systems and processes associated with important ecosystem functions and services, the restoration of oyster reefs is a focus of marine conservation measures worldwide. In the context of marine spatial planning and complex land use conflicts, and aimed at maximising the ecological success of such restoration measures, GIS-based habitat suitability analyses for oyster reintroduction have been conducted. The aim of the present study was to model and identify suitable habitats for the European oyster within the marine protected areas of Borkum Reefground and Sylt Outer Reef in the German Bight for which the restoration of biogenic reefs, namely native oyster reefs is a designated measure. For this purpose, a multi-criteria decision analysis was designed and applied. Based on geodata of the ecological habitat preferences of the European oyster and relevant logistic factors (contraindicated uses), suitable large- scale areas were successfully identified for which a reintroduction of the formerly native species is favourable. Both suitable and unsuitable habitats could therefore successfully be identified for both nature reserves. Due to the large impact of different standardisation procedures for the suitability variables applied, corresponding results may differ quite severely. Hence four different classifications were applied on the most important factor, ground fisheries accounting for a relative weighting of ca. 30% in the derived suitability formula. The results undermine the necessity of well-grounded scientific and practical reasons to decide on a suitable classification procedure in the multicriteria analysis.