Items where Author is "Fogarty, Emily C"

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Veseli, I. ORCID: https://orcid.org/0000-0003-2390-5286, Chen, Y. T. , Schechter, M. S. , Vanni, C. , Fogarty, E. C. , Watson, A. R. , Jabri, B. , Blekhman, R. , Willis, A. D. , Yu, M. K. , Fernàndez-Guerra, A. , Füssel, J. and Eren, A. M. ORCID: https://orcid.org/0000-0001-9013-4827 (2025)
Microbes with higher metabolic independence are enriched in human gut microbiomes under stress ,
eLife, 12 .
doi:10.7554/elife.89862.3
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Yu, M. K. , Fogarty, E. C. and Eren, A. M. ORCID: https://orcid.org/0000-0001-9013-4827 (2024)
Diverse plasmid systems and their ecology across human gut metagenomes revealed by PlasX and MobMess ,
Nature Microbiology, 9 (3), pp. 830-847 .
doi:10.1038/s41564-024-01610-3 , hdl:10013/epic.7bb7e20d-bbea-458d-a284-c56f36b8927d
[thumbnail of s41564-024-01610-3.pdf]
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Fogarty, E. C. , Schechter, M. S. , Lolans, K. , Sheahan, M. L. , Veseli, I. ORCID: https://orcid.org/0000-0003-2390-5286, Moore, R. M. , Kiefl, E. , Moody, T. , Rice, P. A. , Yu, M. K. , Mimee, M. , Chang, E. B. , Ruscheweyh, H. J. , Sunagawa, S. , Mclellan, S. L. , Willis, A. D. , Comstock, L. E. and Eren, A. M. ORCID: https://orcid.org/0000-0001-9013-4827 (2024)
A cryptic plasmid is among the most numerous genetic elements in the human gut ,
Cell, 187 (5), 1206-1222.e16 .
doi:10.1016/j.cell.2024.01.039 , hdl:10013/epic.41f8282b-ce80-44a9-9f9f-b12ef8def8e7
[thumbnail of PIIS0092867424001077.pdf]
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Veseli, I. ORCID: https://orcid.org/0000-0003-2390-5286, Chen, Y. T. , Schechter, M. S. , Vanni, C. , Fogarty, E. C. , Watson, A. R. , Jabri, B. , Blekhman, R. , Willis, A. D. , Yu, M. K. , Fernàndez-Guerra, A. , Füssel, J. and Eren, A. M. ORCID: https://orcid.org/0000-0001-9013-4827 (2023)
Microbes with higher metabolic independence are enriched in human gut microbiomes under stress ,
eLife, 4 (06-07), 2023.05.10.540289-2023.05.10.540289 .
doi:10.7554/eLife.89862 , hdl:10013/epic.5812ff84-0c32-4a74-a9ad-84081f35ed61
[thumbnail of 89862-v1.pdf]
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Runde, J. , Veseli, I. ORCID: https://orcid.org/0000-0003-2390-5286, Fogarty, E. C. , Watson, A. R. , Clayssen, Q. , Yosef, M. , Shaiber, A. , Verma, R. , Quince, C. , Gerasimidis, K. , Rubin, D. T. and Eren, A. M. ORCID: https://orcid.org/0000-0001-9013-4827 (2023)
Transient Suppression of Bacterial Populations Associated with Gut Health is Critical in Success of Exclusive Enteral Nutrition for Children with Crohn’s Disease ,
Journal of Crohn's and Colitis, 17 (7), pp. 1103-1113 .
doi:10.1093/ecco-jcc/jjad031 , hdl:10013/epic.54ce949d-75b3-4362-abd9-2e03d6612b2e
[thumbnail of jjad031.pdf]
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Chitale, P. , Lemenze, A. D. , Fogarty, E. C. , Shah, A. , Grady, C. , Odom-Mabey, A. R. , Johnson, W. E. , Yang, J. H. , Eren, A. M. ORCID: https://orcid.org/0000-0001-9013-4827, Brosch, R. , Kumar, P. and Alland, D. (2022)
A comprehensive update to the Mycobacterium tuberculosis H37Rv reference genome ,
Nature Communications, 13 (1), p. 7068 .
doi:10.1038/s41467-022-34853-x , hdl:10013/epic.76519194-808b-46e8-a905-5b60a5707f1f
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